Framework markers |
Marker ID |
Primer 1 |
Primer 2 |
Retention Frequency |
Gene Name |
| |
AFL361 |
CATGCTGCATCAAGTTCTCG |
GCCACCATTATTACCATCAGTG |
0.222 |
|
| |
BL1006 |
CCGATACAGGTCCAAAAGGC |
TCATGCGACTTGAACAGCTC |
0.239 |
|
| |
BM17132 |
ATCTGCCAGTATCACATCAACA |
GTTACTTTTCCAGGCATGAAGC |
0.226 |
|
| |
BM6000 |
ACAGCAATGCCATGGACC |
TGCCATTTGGATGTGTGC |
0.266 |
|
| |
BM9202 |
TCTATGAAGACTTTCAGGACCTTC |
GCATCCCGGTCTCCTATG |
0.223 |
|
| |
BMC1013 |
AAAAATGATGCCAACCAAATT |
TAGGTAGTGTTCCTTATTTCTCTGG |
0.309 |
|
| |
BMS1069 |
GCCCGTACCCAGAAAACC |
GGACCAGACTTCACAGGGAG |
0.209 |
|
| |
BMS2142 |
AAGCAGGTTGATGATCTTACCC |
GTCGGCACTGAAAATGATTATG |
0.117 |
|
F1 |
BMS2389 |
AATGTTAGGTTTACATGCAGCC |
AGGCAATAGGATCTCCACTAGC |
0.194 |
|
F1 |
BMS2503 |
TTGAACAACTACCAGCTTCCC |
GACATGACTGAGCGCGTG |
0.141 |
|
| |
BMS2842 |
GAAACTGCCTGCAAAAGTAATC |
AACTGGTTTTCAGAAGGAGACA |
0.258 |
|
F4 |
BMS501 |
AGGACTGTACCTGATTAGGCAG |
GGGGAGATTTACCAGACAGTT |
0.17 |
|
| |
BMS601 |
CACTAGGACGATGCTCTCAGG |
TCACAAGAGCAATGACGAGG |
0.287 |
|
F2 |
BMS650 |
GCTAGCATTTCCCTGGCC |
CAGAAGCACACAGAGCCAAG |
0.191 |
|
| |
BMS745 |
TAGGGACTTGTTACCCGTGG |
TGCAAGCTGTGAGGAGGAG |
0.233 |
|
F1 |
BP20 |
TCTGTGGGTGAACAAGCAAG |
GGCTCCCTAAAGACCCACTC |
0.129 |
|
F3 |
CSSM065 |
TTCCTGCTTGGTGAAACTTTGAAC |
CAACTCAAAGCTTCAACAGCAGCC |
0.17 |
|
F4 |
DIK042 |
CTATGGAGTAAGAGCCACGG |
CACCCCTTGCCTCTATCTGA |
0.25 |
|
| |
ETH3 |
GAACCTGCCTCTCCTGCATTGG |
ACTCTGCCTGTGGCCAAGTAGG |
0.234 |
|
F3 |
ETV4* |
GCAGTTCTTGGTGCTCTGTGTTC |
CAGATGTAGTGGAGGTGAAACCCC |
0.239 |
|
| |
GFAP* |
CCTGGTAAGATGCACCTCGA |
CTGGAAGTCAGGAGCACTG |
0.161 |
glial fibrillary acidic protein |
| |
HEL10 |
ATCTGCCTGAAGCCAGTCAC |
GGTTTCCTGCACCTGCATGA |
0.228 |
|
| |
IDVGA44 |
GGGAGAATGGATGGAACCAAAT |
TTCGAAGACGGGCAGACAGG |
0.298 |
|
| |
IDVGA46 |
AAATCCTTTCAAGTATGTTTTCA |
ACTCACTCCAGTATTCTTGTCTG |
0.096 |
|
F2 |
IDVGA47 |
GCTCCAGACTTTGGGGGTATTT |
CTGGTGGTTCAGGGGTTAGGAC |
0.172 |
|
F4 |
IDVGA48 |
GCAAGGACTGAGCACCTATTGT |
CAAGCACGGTCTCACTCCAT |
0.215 |
|
F1 |
ILSTS014 |
CTGACTATGGTGATAATCCC |
TCTTTTCCCTTTCCTTCCCC |
0.109 |
|
| |
IOBT34 |
TCCTTCCATCAATGTGTCAGTCC |
TTGGGATTCGGTGGTCAGTCTG |
0.183 |
|
| |
IOBT965 |
AGATCTAGCGCCAGACAGACGTGTCAT |
CCCGGGGTTGTGGGTAAGCGGAGTT |
0.218 |
|
| |
KRT10* |
TGTCTAAAATGCTGTAGCTTTGGTG |
GTTGGGTCCTTACTAAATAACGAGC |
0.181 |
cytokeratin
VI |
| |
LPO* |
ATTGTGCTAGGTAGTGAGATGCAG |
GTCTTTGATTATCCTCCAGGTGTTG |
0.237 |
lactoperoxydase |
| |
MAP2C* |
TTTACCAGACAGTTTAGTTTTGAGC |
AAGGATTCTGTCTGATACCACTTAG |
0.16 |
microtubule
associated protein 2C |
F2 |
OarFCB193 |
TTCATCTCAGACTGGGATTCAGAAAGGC |
GCTTGGAAATAACCCTCCTGCATCCC |
0.204 |
|
F4 |
P4HB* |
CTTGGTGGAGTCCAGTGAGGTG |
CAAGAAGAACTGCTTGCGGAG |
0.181 |
|
F2 |
RM186 |
GGGACCAAAACAGACCAAGA |
CGTGAAATTTGCCTCTGTCC |
0.209 |
|
| |
RM222 |
CCTAGAGAATTCAATGGACTGAAG |
CACAAAGTCACTTTTGTCGGCAA |
0.151 |
|
| |
RM388 |
GGGGACCATCACGTACACTC |
GGGACAGCCAGTCTTCTCAG |
0.245 |
|
| |
RM99 |
CCAAAGAGTCTAACACAACTGAG |
ATCCGAACCAAAATCCCATCAAG |
0.191 |
|
F3 |
STAT5B* |
TCACAGAATGGCAGAGACCAA |
AACACCTGGGTTCACTCAGAT |
0.223 |
signal
transducer and activator of transcription 5B |
F1 |
UWCA33 |
AGTTCAGTGTTGGCGGAAATGA |
CTTTCTATTCATCAGTAATCACAAG |
0.17 |
|
Not included in map |
| |
BMC5012 |
TGAAAGAGAAAGACAGCTGGG |
TCCCATCTATAGCTCCAGCTG |
0.126 |
|
| |
BMS1920 |
TCCCACCTACTTGGAAAATTG |
ATGACTCAATGACCAACTGACC |
0.106 |
|
| |
CHRNB1* |
TCGATTCACTCCGCATCTCAG |
CGACGTTGATGTCCAGAGCAAC |
0.213 |
cholinergic receptor, nicotinic, beta polypeptide
1 |
| |
CSSM70 |
ATACAGATTAAATACCCACCTG |
TTCTAACAGCTGTCACTCAGGC |
0.16 |
|
| |
IDVGA42 |
ACCGTGATGAACTCTGGTTTAC |
GAATTTCATCTAGGGAGGAAGTG |
0.277 |
|
| |
ILSTS73 |
AACAGAGAGTATGGTGGTGG |
GAAAATCCCGTAGACAGAGG |
0.245 |
|
| |
NF1* |
GAGAGATATATCCAACGTGCAAGTG |
TGCCCATGAGACACTCGTTTG |
0.196 |
|
