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Table4. Lengths of conserved autosomal segments in the chicken and mouse comparison

(From paper by Burt et al.,(1999) Nature VOL 402, 25 November)

Gene Combination

N1

N2

No. of

Mapped loci

r

total

No. of

Unbiased loci

r

unbias

Chicken

Mouse

No. of random

Loci per Chr.

NRCAM

1

0

1

1

1

12

18

HMGIC-RAIDD

1

0

4

18.2

1

1

10

GNRH

1

0

1

1

1

14

HISA@

1

0

1

0

1

13

NAGA-H5

1

1

3

9.9

2

9.9

1

15

LGALS4

1

0

1

1

1

7

MASH1-TRA1

1

0

3

1.9

1

1

10

LDHB-TCRB

1

1

4

32.5

3

32.5

1

6

HSD3B1

1

0

1

1

1

3

CRYAA

1

0

1

1

1

17

OTC-ZFX

1

0

2

4.6

1

1

X

LAMP1

1

0

1

1

1

8

RB1

1

0

1

1

1

14

UCP2

1

0

1

0

1

7

PGR-FUT4

1

0

2

7.3

1

1

9

NFYB

1

0

1

1

1

10

WNT11-HBB@

1

0

2

13.7

1

1

7

ZAP20

1

0

1

0

2

1

15

SHH-EN2

1

1

2

1.4

2

1.4

2

5

VIM-MRC1

1

1

2

15.6

2

15.6

2

2

EGFR

1

0

1

0

2

11

ACTB

1

0

1

0

2

5

NPY

1

0

1

1

2

6

FBN2

1

0

1

0

2

18

TGFBR1

1

0

1

1

2

4

PRL-BMP6

1

1

2

24.4

2

24.4

2

13

BCL2

1

0

1

1

2

1

PLAU

1

0

1

1

2

14

ZNF5

1

0

1

1

2

13

YES1-Hs.118167

1

1

2

0.0

1

2

5

PENK

1

0

1

1

2

9

CA2

1

0

1

1

2

3

CALB1

1

0

1

1

2

4

TRHR-MYC

1

0

2

31.1

0

2

15

BMP2

1

0

1

1

3

2

16

TGFB2

1

0

1

1

3

1

ACTN2

1

0

1

1

3

13

HMX1

1

0

1

1

3

5

T-IGF2R

1

1

3

4.1

3

4.1

3

17

VIP-CCNC

1

1

6

35.8

4

28.7

3

10

ME1

1

0

1

0

3

9

EEF1A

1

0

1

1

3

4

BMP5-GSTA2

1

1

2

2.0

2

2.0

3

9

ODC1-MYCN

1

1

2

3.1

2

3.1

3

12

PGK1-FMR1

1

0

3

28.0

1

4

X

6

PAICS-IL8

1

0

7

1.9

1

4

5

IL2-ANX5

1

0

2

0.0

1

4

3

IRF2

1

0

1

0

4

8

TGFBR2

1

0

1

1

4

9

PGM2-MSX1

1

0

2

1

4

5

HXB

1

0

1

0

4

4

CD8A

1

0

1

1

4

6

MAX

1

0

1

0

5

12

7

IGF2-CCND1

1

0

4

24.3

0

5

7

CAPN1

1

0

1

1

5

19

RYR3

1

0

1

1

5

2

PTAFR-HTR1D

1

0

2

0.0

1

5

4

TGFB3-HSPA2

1

1

5

32.2

3

32.2

5

12

BMP4

1

0

1

1

5

14

PSAP

1

0

1

1

6

10

4

SCD

1

0

1

1

6

19

ACTA2-PDE6C

1

1

2

2.0

2

2.0

6

7

MCM6

1

0

1

1

7

2

4

VIL1-GDF8

1

1

8

65.2

3

22.3

7

1

DDIT1

1

0

1

1

8

3

3

GGTB1-PLA2G2A

1

1

2

24.3

2

24.3

8

4

B@-TAP1

1

0

4

1.1

1

16

17

1

MIF

1

0

1

1

E18C15W15

10

3

IGL@

1

0

1

1

E18C15W15

16

CRYBB1-CRYBA4

1

0

2

1

E18C15W15

5

GLI

1

0

1

1

E22C19W28

10

1

TGFB1-RYR1

1

1

2

7.8

2

7.8

E25C31

7

2

GNRHR

1

0

1

1

E29C09W09

5

5

IGF1R-HMX3

1

1

3

12.1

3

12.1

E29C09W09

7

CYP19

1

0

1

1

E29C09W09

9

B2M

1

0

1

0

E29C09W09

2

CCNE

1

0

1

1

E30C14W10

7

2

H2AZ

1

0

1

1

E30C14W10

3

MYH@-HLF

1

1

6

99.2

6

99.2

E31E21C25W12

11

6

HCK-BMP7

1

0

2

2.0

1

E32

2

1

HBA@

1

0

1

0

E35C18W14

11

0

TFRC-EIF4A2

1

1

2

6.9

2

6.9

E36C06W08

16

4

NCL-PAX3

1

0

2

7.6

1

E36C06W08

1

SNON

1

0

1

1

E36C06W08

3

RPL7A-CD39L1

1

1

4

42.6

3

42.6

E41W17

2

4

AMBP

1

0

1

1

E41W17

4

HSF1

1

0

1

1

E46C08W18

15

2

ITGAM

1

0

1

1

E46C08W18

7

IRF1

1

0

1

0

E48C28W13

11

4

CAMLG

1

0

1

1

E48C28W13

13

POU4F3-CDX1

1

1

3

12.4

2

12.4

E48C28W13

18

MSX2

1

0

1

1

E48C28W13

13

ETS1-APOA1

1

1

5

64.3

3

43.6

E49C20W21

9

3

CRK

1

0

1

1

E52W19

11

1

CAMK4

1

0

1

1

E53C34W16

18

2

AMH

1

0

1

1

E53C34W16

10

CDC2L1-SLC2A1

1

1

5

72.2

5

72.2

E54

4

5

TP53

1

0

1

1

E57

11

1

GH-COL1A1

1

0

3

1

E59C35W30

11

1

TCRA-DAD1

1

0

2

0

E59C35W30

14

TOTAL

100

22

185

711

121

499

121

G (autosomes, cM)

3900

T (homologous loci)

121

D (loci/cM)

0.0310

G, total size of autosomal genetic linkage map (cM)
T, total number of orthologous genes
D, mean gene density over genome (genes/cM)
N2, number of conserved segments with 2 or more genes mapped (ranges) at random
r total, ranges based on all genes mapped
r unbiased, ranges based on genes mapped at random

Pages last modified on 24th November 1999 by Irene Black